Input Preparation

If you cleaned your reads using Captus then the data is ready for analysis inside the directory you chose for the cleaned reads (./01_cleaned_reads/ by default). Then you can proceed to check the Options of the assemble command.

Note

If you want to provide reads cleaned elsewhere, please follow the same naming convention required for raw reads and place your FASTQ files preferably in a single directory.

Created by Edgardo M. Ortiz (06.08.2021)
Last modified by Edgardo M. Ortiz (29.05.2021)